cgminer for linux.
I searched for cgminer windows and switches for setup in windows but can't find anything what works.
do you have any links or how to setup cg miner so I can work on my computer and mine and when I don't work it uses both graphics and cpu but only 95% of it to prevent overheating?
No, cgminer can be used on windows too. You can download the binary here
http://ck.kolivas.org/apps/cgminer/cgminer-3.1.0-windows.zip.
By default cgminer will set intensity to "d", which will maintain desktop interactivity.