If it always boots with one card on a riser plugged in, try every card in that config to rule out a problem with the hardware.
Then try each pci-e slot out.
Sorry, I don't have time to read a reddit thread (does anyone?)
Yea Makes sense(about reddit) so here is TLDR
I did try to swap places/ rizers/ etc ...
It seems there are other people on linux experiencing identical problems on the usb powered rizers.
Strange is on other motheboards when I run 3-4 cards everything is fine and I only experience a similar problem if a rizer is not well connected to the board or card or the cards pcie are not well connected.
This is the xorg.conf
http://pastebin.com/SGe2mLy9Xorg Log
http://pastebin.com/Bv0dPUGX