I just have it set up to run again in a .bat setting the clock speeds to normal. Like this:
cgminer.exe -l 10 -o http://gpumax.com:8332 -u 4f2629c958d5d914e001d1f5 -p abc123 -o tygrr.zapto.org:8337 -u Garr255 -p asdf -o http://pool.bitclockers.com:8332 -u garrett -p yayforbitcoins -o http://api2.bitcoin.cz:8332 -u garr255.garrett -p slushy -I 9,4 --gpu-engine 877,877 --gpu-memclock 350,350 --gpu-fan 85,85 --temp-overheat 80,80 --temp-cutoff 85,85
pause
cgminer.exe -l 10 -o http://gpumax.com:8332 -u 4f2629c958d5d914e001d1f5 -p abc123 -o tygrr.zapto.org:8337 -u Garr255 -p asdf -o http://pool.bitclockers.com:8332 -u garrett -p yayforbitcoins -o http://api2.bitcoin.cz:8332 -u garr255.garrett -p slushy -I 4 --gpu-engine 725,725 --gpu-memclock 1000,1000 --temp-overheat 80,80 --temp-cutoff 85,85
pause