I use coinapult as my hot wallet and whenever i send bitcoins from this wallet. I see in all my transactions on blockchain.info there is a warning message like "This transaction has a none standard input" in front of estimated confirmation time.
Can anyone explain what does it mean? The tx however,gets confirmed eventually always.
It means just that, the transaction is non standard. The most likely reason for this is that the signature uses a High S value which is non standard. This means that coinapult is not staying up to date with the latest standards.