When discussing about Electrum, what you use for encryption is the password, but if you extend the seed phrase with extra word, we referred to it as passphrase.
What you called the seed extension is called passphrase.
PS: I think I overthought here. If I simply use the seed extension as passphrase, this should in theory work and protect the wallet in the way I thought. For whatever reason I thought this would result in a situation where the security would be actually reduced regarding both using a passphrase and a seed extension
Yes, you are very correct.
I prefer to use a password that I know offhand on Electrum. I will remember the password as I use Electrum often, but if I forget it, I can recover my coins through the seed phrase and passphrase. I do not go for wallet file backup. But even if I go for wallet file backup, I will prefer to use different characters for it that is not the same as my passphrase/seed extension.
But if the same characters are used for both passphrase and for wallet file encryption, I do not think the security of the wallet is reduced at all because only one is needed to have access to your coins. So far the passphrase and the file encryption password is not on the device and protected somewere esle, the wallet security is not reduced.