There are nine other chassis (each with CD drive and floppy drive) needed to be include in that calculation.
However, I'm not counting the CD drive or floppy drive in the value. It's part of the chassis from my view. And the SSD drive is maybe $100 (not $300)...so subtract $230.
But still add the nine additional chassis.
Keep in mind, the 6990's are high demand/low supply. They are the highest performance GPU's for mining, and are hard to find available for any timely delivery. As proof, try to find a 6990 that is immediately available online. I haven't checked in a while, but I'd bet you'll find them either sold out, not in stock or weeks from delivery. From just that, they carry more value than retail costs.
As for condition, the system has been used for only a month now. Proven to work. The extra chassis are in excellent condition.
I'm not really sure why some one would want 9 empty chassis. I guess if they plan to expand like crazy but still that shouldn't be included in this price you should just sell that separately if a buyer doesn't want them.
As for the 6990 they are no where to be found but they aren't that spectacular of a mining card. It's ok on electricity and it definitely requires the least amount of space but its megahash per dollar committed to a full server is pretty horrible.
If we went with the cost excluding the 9 extra chassis and including your price cut we have a cost of 2,285. Assuming you get 820 megahash per card thats 1640 megahash.
1640/2285 is .71 megahash per dollar.
An efficient 5830 rig could get 1.36 megahash per dollar so it would cost about 1,205 dollars for the same speed.
2285-1205 = $1080 waisted.
If you live in an apartment or house where electricity isn't included it would still take a very long time to make up for the waisted electricity (upwards of a year maybe even longer I haven't done the calculations)
Who knows the state of bitcoins in a year or more it could be completely gone for all we know or the difficulty could sky rocket. So yes the 6990 may be impossible to find right now but that doesn't mean people should pay more for a used card.